How-to guides
Data Preparation
- How can I use my own customized reference files?
- How do I convert my input file to an eligible input format that the pipeline can recognize?
- How do I customize the code to recognize headers in my file?
- How do I generate a YAML file for input files?
Running the pipeline
- How do I handle large-scale datasets with the pipeline?
- If I run multiple files in one job, how can I monitor the progress for each individual sumstat?